Archive for July, 2010


a bit of down time

If the winds are above 25 knots, Alvin does not dive. There was no dive yesterday for this reason, and it looks like today’s dive may be cancelled as well (although there is a chance it will happen since the winds are calming down). Losing dives is unfortunate because everyone is counting on the number of dives that were planned, and no one wants to let go of their science.

Kiana and I currently have about 400 tubes worth of experiments running, but we wont have any new sample to work with for a couple of days. This means things are relatively calm. Last night we helped sample a sediment core and today we get to try to set up a high pressure high temperature incubation setup. In our lab we like to keep things interesting by dealing with all sorts of potentially dangerous things (radioactivity, heat, pressure, chemicals, heavy objects, power tools) while rocking at sea. Woohoo.

In other news, today is the mid point of our cruise. This is hard to believe because things are moving very quickly. I know that once we pass the half way mark it will just accellerate as well. We are super-excited though, because we found a mysterious “hump day” box in our luggage when we arrived on the boat. Two wonderful colleagues (Mark and Suni, you rock) stealthily snuck it in to our bag, and we have been eagerly anticipating the opening!

lyrical stylings

Kiana and I have re-written the first verse of “Ice Ice Baby” to convey our isotope van experience… enjoy (G-BAC = Girguis bad-ass crew, FLOKCH = heather + kiana initials)

Yo G-BAC let’s kick it

Hot hot radvan (x2)

All right stop decontaminate and listen

FLOCKH is back with a brand new invention

Isotopes grab a hold of me tightly

Flow like a waterbath daily and nightly

Will it ever stop yo I don’t know

Turn off the lights and we glow

To the extreme we rock the van like a big swell

Light up the boat and wax a chump like a candle

Dance go rush to the waves that hurdle

I’m mutating your babies like a ninja turtle

Deadly when we do our dope science

Anything less than the best is defiance

Love it or leave it you better reduce sulfate

Safety is for pussies wicked cool graphs await

If there’s a problem yo we’ll solve it

Check out how hot while the scint’later counts it

Hot hot radvan, frickin/wicked

My Dive… finally

This is far from polished… or even complete… but I wanted to share something, and show that I actually have been thinking of you all! This is first rough draft of my description of my Alvin dive… It is more of a collection of thoughts than a complete narrative so far.

01:49 7.12.10 Steaming back towards Astoria, continued 01:15 7.14.10

What a day. I woke up before my alarm filled with those butterflies that tend to pay visits before new exciting adventures. I ate a small breakfast (trying to minimize intestinal activity while in the sub) and kind of hovered until it was time to go. Kiana and Charles were there to see me off. I walked up the stairs to the sub, took off my shoes (not allowed in) and climbed down the hatch into the titanium sphere. It was comfortable and cozy (for me much more so than the extremely tall person I was diving with). The sub was hoisted up and lowered into the water and the swimmers did all of their safety checks while we bobbed around on the surface. Eventually we were cleared to go and the decent started.

One of the first things that I noticed was a small drip of water on the bottom of my window. It really looked like water was seeping in, but I didn’t want to be that noobie who seems scared, so I didn’t mention it. It turned out to just be condensation, so I am glad I decided against asking the pilot about it!

The water began a pretty bright blue, I was surprised at the blueness of it considering it was a dreary gray day above the surface. Over the next 500 meters (which took about 15 minutes) the blue faded almost imperceptibly to black, and then, somehow, to darker black as we descended even lower. For most of the drop (and we were literally dropping… Alvin descends simply with weights that it sheds at the bottom when it is time to ascend) my face was pressed to my small (8”?) window with my hands cupped around my head to block out the lights from inside the sub.

The one bummer was that we (technically the pilot, but I feel partially responsible for not checking) forgot the laptop that is supposed to communicate with one of our instruments. This meant that we could not use the instrument on the dive, which is a bummer because it would have provided us with chemical data to go along with the samples that we took. The upside was that it meant we had a bit more time to explore and collect.

I sat with my back to the foam pad that separated me from the chilly titanium wall, looking over my right shoulder through my window. Literally the entire way down there was a bioluminescent light show. It is easy to think of the mid-waters of the ocean as empty, but I can now tell you first hand that this is not true. Scientists used to think that it was, but this is because most of the organisms that inhabit this vast area are soft and fragile and nearly invisible with lights on, so they are not well studied. It was interesting to begin to tell different types of light apart, much like at the fireworks. There were some umbrella shaped ones that literally looked like the sacred seeds from Avatar, strings of light, lights that seemed to explode when we got near, tiny dots, larger dots, and trails of light. It seemed that you often saw most of one kind or another, but the dominant light form would change with depth. All were exactly the same blue color. Occasionally I could almost make out the shape of a larger animal from the bioluminescence, but the light always dissipated before I could be sure.

Just by chance, we landed literally on top of one of the places we needed to sample. It was a total coincidence, but very cool. We had to do some other things before we collected that sample, though, so we flew over a bit to find the cameras we were supposed to collect first. The bottom was basalt that looked like it was covered with a thin layer of brownish dust. It alternated between pillow like flows, and jagged chunks. We even passed a few crevasse-like features. In the relatively bare open areas there were lots of small snails, creeping around with a long white protuberance, much like an elephant trunk. The other organism that appeared common in these non-venting areas were Picnogonads (sp?) – very cool little sea spiders.

Periodically we would pass by areas of diffuse flow (warm water seeping up through the crust) large bushes of skinny tubeworms. Each worm was a foot or two long and maybe a centimeter across, but they certainly seemed to dominate the landscape wherever warm water was flowing. When I was able to look closer I realized that these worm bushes were actually dense mats of multiple types of animals. There were scale worms, non-tube worms, small white fish – they made up communities just like I have seen in photographs… go figure.

Randomly throughout the dive I would notice that there was music playing softly in the sub, the playlist had a lot of dispatch and familiar female vocalists. The mellow upbeat tubes that were perfect for the mood of the dive.

The highlight of the dive was seeing the hydrothermal vent chimneys. I was astounded by the sheer mass of some of the structures. At times, I would look out of my window, and not be able to see the top of the structure we were looking at. Other chimneys were smaller, and more what I had expected. We saw a lot of warm flowing white smoker, and a few hot black smokers. One we measured venting fluid that was 306°C. We were able to get an awesome sample from that chimney (names Hulk) that had beautiful pyrite growing throughout its inside. It was especially cool to visit Hulk because that is where one of the samples I was working with all year comes from. It is actually the one sample I have DNA from so far. Having seen the structure in person certainly makes me feel more connected to the work I am doing!

Collecting samples of the sulfide rocks that make up these chimneys is an almost stressful experience. Much of the rock is pretty soft, and more than once the sample that I was sure would be amazing, simply crumbled in Alvin’s claw before we cold collect it. Each time I watched with anticipation and held my breath waiting to see if we would be able to collect the desired sample. We had a lot to collect, and ended up putting two sulfide samples in non-conventional places for the trip back to the surface. We were not entirely sure they would make their way up. I was thrilled to learn that they did, despite the rough waters waiting for us at the surface.

In addition to collecting sulfides on our dive, we were tasked with searching for two different specific types of worms. One was a specific variety of tubeworms that Alvin could grab with its claw. The second was the smaller non-tube worms that we collected with a “slurp”. A slurp is basically a large hose that literally slurps up whatever we put it next to. We actually took the slurp sample while hovering in the water rather than sitting on the bottom like with most sampling. This was another impressive feat by the pilot.

Additionally, we had to find 3 cameras (as I mentioned earlier). This was no easy task. Even with coordinates and directions finding something on the bottom of the ocean gets tricky. I certainly have better appreciation for people who are able to locate things like ship wrecks with much less information. Our final objective (although we didn’t do them in this order) was to collect a series of bags of substrate (bone, wood, rock) that had been left out to see what types of organism collect on them, and if the material itself determines what organisms end up there. These were surprisingly easy to find (partially because we had accidentally landed right on top of one of them). The interesting part to this was watching the pilot deftly manipulate Alvin’s arms to grab the rope ring that was attached to each bag, and place the bag in to the correct compartment of the sample collection box. Things that seems incredibly simple (like picking something up) are much more complicated with a large robotic arm, under water (duh!).

Throughout the dive I was tasked with operating a video camera that is constantly recording as well as sharing a hand held camera and video camera with the other observer. It was certainly a challenge to juggle watching, recording, photographing, and paying attention to sample collecting.

The end of the dive came too quickly, and I will describe the rest of the dive later. However, I will tell you that there were jellies, bubbles, and porpoises!

Deepest depth: 2206 meters!

Looooong day

I am tired, and still have processing to do, but I wanted to briefly share that I had an amazing day in the deep sea.  It makes me feel more legit now that I have been down and actually seen some of the places I study.  I want to try to describe the dive itself well, so I am going to wait on that, but we got lots of samples, which I spent the evening processing with Kiana and Adrienne.  We even made up a dance move called the boat shuffle since the seas are pretty rough an we are stumbling all over the place.  Stay tuned…

!!!!!!!!!

Tomorrow, I dive!

Today was productive.  I wouldn’t say we did any science, but we are certainly getting ready to!  Kiana, Pete and I spent a long time today getting seawater plumbed to our van.  This involved pumps, filters, various fittings and clamps, and of course, many lengths of garden hose.  We ended up flooding the van in the process, but lets not dwell on that, shall we?  Seawater alll over equipment = recipe for corrosion.  The good thing is that you can just hose it out.

We also started putting together all the valves and fittings for our high pressure pumps.  These allow us to keep titanium vessels at the same pressures that exist on the ocean floor.  Very cool, but a bit scary if you are also heating the contents of the vessel.

The work day ended with a bit of danger laced crafts time.  We  sewed titanium mesh into a burrito shape with titanium wire (this stuff is sharp, and on a rocky boat leaves your finger quite sore).  These burritos will be filled with things that microbes can grow on and left in a chimney for a while to see what grows on them.

I am really excited by the idea of getting to bed before midnight.  We are currently transiting to a new site where we will dive tomorrow.  Hopefully we will get samples for Kiana and I to work with.

That’s all for now… more pictures soon.

I am back to feeling 100% and have even had an apetite for the last two meals (which were awesome by the way)!

Just watched Alvin launch… very cool.  It is quite an involved process as you might imagine.  In addition to the folks on deck watching and directing the process there are two swimmers who stand on Alvin as it gets lowered into the water.  The swimmers do various safety checks before they clear the sub to dive and are then picked up by a Zodiac boat.

We collected bottom water last night with a CTD (conductivity, temperature, depth) cast.  A carousel of 10 liter bottles with top and bottom held open (this is the CTD) is lowered by a large winch.  From inside the computer lab we can watch a screen and see various water parameters as the CTD descends.  When it gets to the desired location (last night that was about 50 meters above the bottom) we tell it to release the bottle lids and bottoms – capturing 10 liters of bottom water per bottle.

Today we used the water we collected last night as well as some creative engineering and troubleshooting to get our water system pumping so that it is good to go as soon as we have our sample and can start our experiments.  Octavian has been an enthusiastic helper throughout the process.  However, his favorite part so far has been sitting on the bow and staring off over the ocean! [pictures to follow soon... the internet is a bit too slow at the moment]

Rocky start

I spent pretty much all of yesterday in bed. I felt fine lying down, but being vertical was a problem. Today I feel much better, but still not 100%. We were going to have the first Alvin dive today, but the weather did not allow that. I think its because the swells were too large. It turns out many of the seasoned crew were feeling it too. I don’t know why I assumed that a bigger ship would be easier in terms of sea sickness – it certainly feels like it is rocking more than I remember the Westward going. Oh well. Today we did some plumbing to set our systems in the van. We are almost at the point where all we need is samples to get started. That is pretty exciting. Hopefully we will do some bottom water sampling from the ship today so that we can begin get our experimental setups running.

The Work Begins

I am writing from my phone because my hotel in Astoria has no wireless. Sorry if this is short. We have made it to the boat, but we don’t move on board until tomorrow. As soon as we walked on board we walked past Alvin. It was really exciting to see up close. I was even able to shake its “hand”. We spent yesterday unpacking and setting up 3 different lab spaces. Moving heavy water baths around a ship is certainly a challenge!

Octavian clearly can’t wait to get to sea. (see photo)

Also we had an amazing dinner last night that Octavian also enjoyed. (see other photo)

The Journey Begins

Octavian stowes away in my luggage!

01:58 EST, 23:05 local time Portland Mariot, Portland, OR

This is Octavian.  He decided to come along on the cruise.  He was given to me by a friend in Texas (thanks Jenni!).  He is looking forward to being photographed on the ship and starring in this blog.

Travel day was a success.  We arrived in Portland on time, with all of our mysterious science gear luggage… well most of us did.  5 out of 7 isn’t too bad.  On our San Francisco layover Melissa and Geoff decided to take United Airlines up on one of those give up your seat get a $400 travel voucher deals, so they will get in tomorrow.  Hopefully they had a fun evening in San Francisco.  We are looking forward to finding creative ways for them to repay us for their little getaway ;)

We had a funny moment in the airport when Pete’s computer died (no, that’s not the funny part).  I decided that maybe my traveling companion Octavian could help with the fix.  As soon as Octavian came out of my bag it became immediately obvious that Geoff, Charles, and Melissa also have small squishy travel companions!  They put their noggins together, but were still unable to fix the laptop.  It will be interesting to see what shenanigans they get in to on the boat.

The team tries to fix Pete's computer.

I am looking forward to sleep.  The airplane was super dry and I have a bit of a sore throat.  However, I am fully confident that will be gone tomorrow… being sick on the boat is really not an option.  Tomorrow we pick up chemicals from a colleague who ordered them for us.  It is actually a big pain to order certain chemicals and have them sent somewhere other than the address you have on file with the company, so figuring out how to get these chemicals to the West coast took some creativity.  It is nice to have friends in labs throughout the country to call on for these types of favors.

Goodnight.

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